Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm7222-201ENSMUST00000117512 906 ntBASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm5682-201ENSMUST00000173402 505 ntBASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm2451-201ENSMUST00000199447 999 ntBASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm10290-201ENSMUST00000200451 999 ntBASIC11.48□□□□□ -0.57
Smco3Q8BQM7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.47□□□□□ -0.57
Smco3Q8BQM7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Gm6089-201ENSMUST00000197666 938 ntBASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms