Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chmp2bQ8BJF9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2bQ8BJF9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.27□□□□□ -0.12
Chmp2bQ8BJF9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2bQ8BJF9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms