Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Grk6-205ENSMUST00000224653 2976 ntBASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Gm18049-201ENSMUST00000208909 581 ntBASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh20Q8BIZ0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Gm5479-201ENSMUST00000160578 435 ntBASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Gm22175-201ENSMUST00000175007 78 ntBASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.63□□□□□ -0.23
Pcdh20Q8BIZ0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh20Q8BIZ0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms