Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Rubie-203ENSMUST00000227803 2430 ntBASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Slc5a7Q8BGY9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Slc5a7Q8BGY9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slc5a7Q8BGY9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Gm5479-201ENSMUST00000160578 435 ntBASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Gm2272-201ENSMUST00000194903 582 ntBASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc5a7Q8BGY9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Gm7284-201ENSMUST00000131667 944 ntBASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Gm2445-201ENSMUST00000182798 989 ntBASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc5a7Q8BGY9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms