Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubp1Q811S7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.77□□□□□ -0.2
Ubp1Q811S7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ubp1Q811S7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ubp1Q811S7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ubp1Q811S7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ubp1Q811S7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ubp1Q811S7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Ubp1Q811S7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Ubp1Q811S7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ubp1Q811S7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.77□□□□□ -0.21
Ubp1Q811S7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Gm25925-201ENSMUST00000158314 306 ntBASIC13.77□□□□□ -0.21
Ubp1Q811S7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.77□□□□□ -0.21
Ubp1Q811S7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.77□□□□□ -0.21
Ubp1Q811S7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.77□□□□□ -0.21
Ubp1Q811S7 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.77□□□□□ -0.21
Ubp1Q811S7 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.77□□□□□ -0.21
Ubp1Q811S7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ubp1Q811S7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Gm15460-201ENSMUST00000118147 391 ntBASIC13.76□□□□□ -0.21
Ubp1Q811S7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubp1Q811S7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Ubp1Q811S7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.75□□□□□ -0.21
Ubp1Q811S7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.75□□□□□ -0.21
Ubp1Q811S7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.75□□□□□ -0.21
Ubp1Q811S7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ubp1Q811S7 Gm3436-201ENSMUST00000179930 840 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms