Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm6621-201ENSMUST00000193251 772 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trnp1Q80ZI1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trnp1Q80ZI1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trnp1Q80ZI1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trnp1Q80ZI1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.58■□□□□ 0.09
Trnp1Q80ZI1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trnp1Q80ZI1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trnp1Q80ZI1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trnp1Q80ZI1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Gm15370-201ENSMUST00000117158 253 ntBASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Gm13297-201ENSMUST00000120205 934 ntBASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Gm16372-201ENSMUST00000073088 450 ntBASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trnp1Q80ZI1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Gm6222-202ENSMUST00000182143 629 ntBASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trnp1Q80ZI1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Gm25668-201ENSMUST00000157700 129 ntBASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Gm17376-201ENSMUST00000166016 84 ntBASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Gm7046-201ENSMUST00000221351 977 ntBASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms