Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Gm4913-201ENSMUST00000117075 1290 ntBASIC14□□□□□ -0.17
Usp8Q80U87 Rprl2-201ENSMUST00000157150 290 ntBASIC14□□□□□ -0.17
Usp8Q80U87 Gm25911-201ENSMUST00000157621 56 ntBASIC14□□□□□ -0.17
Usp8Q80U87 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14□□□□□ -0.17
Usp8Q80U87 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Usp8Q80U87 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Usp8Q80U87 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14□□□□□ -0.17
Usp8Q80U87 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Usp8Q80U87 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14□□□□□ -0.17
Usp8Q80U87 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Usp8Q80U87 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp8Q80U87 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Usp8Q80U87 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14□□□□□ -0.17
Usp8Q80U87 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Usp8Q80U87 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Usp8Q80U87 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.99□□□□□ -0.17
Usp8Q80U87 Gm4995-201ENSMUST00000117247 432 ntBASIC13.99□□□□□ -0.17
Usp8Q80U87 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.99□□□□□ -0.17
Usp8Q80U87 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.99□□□□□ -0.17
Usp8Q80U87 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.99□□□□□ -0.17
Usp8Q80U87 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.99□□□□□ -0.17
Usp8Q80U87 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Usp8Q80U87 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Usp8Q80U87 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.99□□□□□ -0.17
Usp8Q80U87 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Usp8Q80U87 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Usp8Q80U87 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.98□□□□□ -0.17
Usp8Q80U87 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.98□□□□□ -0.17
Usp8Q80U87 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Usp8Q80U87 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Usp8Q80U87 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Usp8Q80U87 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.98□□□□□ -0.17
Usp8Q80U87 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.98□□□□□ -0.17
Usp8Q80U87 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.98□□□□□ -0.17
Usp8Q80U87 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.98□□□□□ -0.17
Usp8Q80U87 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.98□□□□□ -0.17
Usp8Q80U87 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.98□□□□□ -0.17
Usp8Q80U87 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.98□□□□□ -0.17
Usp8Q80U87 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Usp8Q80U87 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Usp8Q80U87 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms