Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Gm16570-201ENSMUST00000161951 436 ntBASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Dupd1-202ENSMUST00000224735 548 ntBASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38bQ80SY5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38bQ80SY5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Gm9229-201ENSMUST00000222777 126 ntBASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Prpf38bQ80SY5 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.58□□□□□ -0.07
Prpf38bQ80SY5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.58□□□□□ -0.07
Prpf38bQ80SY5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf38bQ80SY5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Prpf38bQ80SY5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf38bQ80SY5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf38bQ80SY5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf38bQ80SY5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms