Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rad54bQ6PFE3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Gm5566-201ENSMUST00000116118 459 ntBASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Mir1895-201ENSMUST00000122615 79 ntBASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Gm9824-201ENSMUST00000178707 561 ntBASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Gm18206-201ENSMUST00000207027 926 ntBASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rad54bQ6PFE3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Gm9719-201ENSMUST00000162765 543 ntBASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rad54bQ6PFE3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms