Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Gm1335-201ENSMUST00000121653 386 ntBASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Gm29741-201ENSMUST00000192667 421 ntBASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Gm38002-201ENSMUST00000193255 180 ntBASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Gm38266-201ENSMUST00000194931 421 ntBASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Gm24447-201ENSMUST00000083977 338 ntBASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Snrnp40Q6PE01 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snrnp40Q6PE01 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Gm27516-201ENSMUST00000184237 98 ntBASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Mir8109-201ENSMUST00000184375 117 ntBASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.2□□□□□ -0.46
Snrnp40Q6PE01 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snrnp40Q6PE01 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms