Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Birc2-201ENSMUST00000054878 378 ntBASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf220Q6PDX6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf220Q6PDX6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf220Q6PDX6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf220Q6PDX6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rnf220Q6PDX6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf220Q6PDX6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf220Q6PDX6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf220Q6PDX6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rnf220Q6PDX6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rnf220Q6PDX6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Gm11764-201ENSMUST00000120221 623 ntBASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Gm5682-201ENSMUST00000173402 505 ntBASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Gm43347-201ENSMUST00000200226 580 ntBASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf220Q6PDX6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Gm27459-201ENSMUST00000184860 107 ntBASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Gm34391-201ENSMUST00000203706 907 ntBASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf220Q6PDX6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms