Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.09■□□□□ 0.17
Scn9aQ62205 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.09■□□□□ 0.17
Scn9aQ62205 Gm24548-201ENSMUST00000158650 108 ntBASIC16.09■□□□□ 0.17
Scn9aQ62205 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Scn9aQ62205 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Scn9aQ62205 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Scn9aQ62205 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.09■□□□□ 0.17
Scn9aQ62205 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn9aQ62205 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn9aQ62205 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn9aQ62205 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn9aQ62205 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.08■□□□□ 0.16
Scn9aQ62205 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm24830-201ENSMUST00000102024 166 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.08■□□□□ 0.16
Scn9aQ62205 Mir5120-201ENSMUST00000175020 78 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm25890-201ENSMUST00000177643 165 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm22614-201ENSMUST00000178300 165 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm29787-201ENSMUST00000222129 849 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm22042-201ENSMUST00000082989 165 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm26232-201ENSMUST00000083360 166 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm24136-201ENSMUST00000083374 165 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm26110-201ENSMUST00000083971 165 ntBASIC16.08■□□□□ 0.16
Scn9aQ62205 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Scn9aQ62205 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Scn9aQ62205 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scn9aQ62205 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Gm22902-201ENSMUST00000158488 302 ntBASIC16.07■□□□□ 0.16
Scn9aQ62205 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.07■□□□□ 0.16
Scn9aQ62205 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.07■□□□□ 0.16
Scn9aQ62205 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Scn9aQ62205 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Scn9aQ62205 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Scn9aQ62205 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.07■□□□□ 0.16
Scn9aQ62205 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.07■□□□□ 0.16
Scn9aQ62205 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.07■□□□□ 0.16
Scn9aQ62205 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn9aQ62205 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Scn9aQ62205 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Mospd4-201ENSMUST00000180618 576 ntBASIC16.06■□□□□ 0.16
Scn9aQ62205 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms