Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zic4Q61467 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zic4Q61467 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zic4Q61467 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.29□□□□□ -0.6
Zic4Q61467 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zic4Q61467 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zic4Q61467 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Zic4Q61467 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zic4Q61467 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Zic4Q61467 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zic4Q61467 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Zic4Q61467 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Zic4Q61467 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Zic4Q61467 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Zic4Q61467 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Gm7153-201ENSMUST00000117092 455 ntBASIC11.28□□□□□ -0.6
Zic4Q61467 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.28□□□□□ -0.6
Zic4Q61467 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.28□□□□□ -0.6
Zic4Q61467 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.28□□□□□ -0.6
Zic4Q61467 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.28□□□□□ -0.6
Zic4Q61467 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.28□□□□□ -0.6
Zic4Q61467 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Zic4Q61467 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Zic4Q61467 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Zic4Q61467 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Zic4Q61467 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Zic4Q61467 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.27□□□□□ -0.6
Zic4Q61467 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Zic4Q61467 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Zic4Q61467 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Zic4Q61467 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.27□□□□□ -0.6
Zic4Q61467 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Zic4Q61467 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Zic4Q61467 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.27□□□□□ -0.6
Zic4Q61467 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Zic4Q61467 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Gm15957-201ENSMUST00000118893 974 ntBASIC11.27□□□□□ -0.61
Zic4Q61467 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.27□□□□□ -0.61
Zic4Q61467 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.27□□□□□ -0.61
Zic4Q61467 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.27□□□□□ -0.61
Zic4Q61467 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.27□□□□□ -0.61
Zic4Q61467 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.27□□□□□ -0.61
Zic4Q61467 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.27□□□□□ -0.61
Zic4Q61467 Gm6376-201ENSMUST00000209407 580 ntBASIC11.27□□□□□ -0.61
Zic4Q61467 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Zic4Q61467 Gm18669-201ENSMUST00000216049 778 ntBASIC11.27□□□□□ -0.61
Zic4Q61467 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.27□□□□□ -0.61
Zic4Q61467 AV026068-213ENSMUST00000223675 1171 ntBASIC11.27□□□□□ -0.61
Zic4Q61467 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.27□□□□□ -0.61
Zic4Q61467 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Zic4Q61467 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Zic4Q61467 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Zic4Q61467 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Zic4Q61467 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Zic4Q61467 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms