Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd1Q61466 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd1Q61466 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Smarcd1Q61466 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Gm8515-201ENSMUST00000194852 576 ntBASIC14.5□□□□□ -0.09
Smarcd1Q61466 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.5□□□□□ -0.09
Smarcd1Q61466 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.5□□□□□ -0.09
Smarcd1Q61466 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd1Q61466 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcd1Q61466 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Gm18018-201ENSMUST00000198273 408 ntBASIC14.49□□□□□ -0.09
Smarcd1Q61466 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.49□□□□□ -0.09
Smarcd1Q61466 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.49□□□□□ -0.09
Smarcd1Q61466 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.49□□□□□ -0.09
Smarcd1Q61466 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Smarcd1Q61466 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.48□□□□□ -0.09
Smarcd1Q61466 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Gm14928-201ENSMUST00000120198 477 ntBASIC14.48□□□□□ -0.09
Smarcd1Q61466 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Mir6392-201ENSMUST00000184924 108 ntBASIC14.48□□□□□ -0.09
Smarcd1Q61466 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Smarcd1Q61466 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.48□□□□□ -0.09
Smarcd1Q61466 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.48□□□□□ -0.09
Smarcd1Q61466 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd1Q61466 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms