Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd53Q61451 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd53Q61451 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd53Q61451 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd53Q61451 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cd53Q61451 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd53Q61451 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.89□□□□□ -0.35
Cd53Q61451 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd53Q61451 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd53Q61451 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cd53Q61451 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.88□□□□□ -0.35
Cd53Q61451 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cd53Q61451 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.88□□□□□ -0.35
Cd53Q61451 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.88□□□□□ -0.35
Cd53Q61451 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Gm27430-201ENSMUST00000184585 107 ntBASIC12.88□□□□□ -0.35
Cd53Q61451 Gm44333-201ENSMUST00000197168 107 ntBASIC12.88□□□□□ -0.35
Cd53Q61451 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.88□□□□□ -0.35
Cd53Q61451 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cd53Q61451 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cd53Q61451 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.88□□□□□ -0.35
Cd53Q61451 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Cd53Q61451 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cd53Q61451 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd53Q61451 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cd53Q61451 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Cd53Q61451 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.87□□□□□ -0.35
Cd53Q61451 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cd53Q61451 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cd53Q61451 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cd53Q61451 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.87□□□□□ -0.35
Cd53Q61451 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.87□□□□□ -0.35
Cd53Q61451 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.87□□□□□ -0.35
Cd53Q61451 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cd53Q61451 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.87□□□□□ -0.35
Cd53Q61451 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cd53Q61451 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cd53Q61451 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cd53Q61451 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.87□□□□□ -0.35
Cd53Q61451 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.87□□□□□ -0.35
Cd53Q61451 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cd53Q61451 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.87□□□□□ -0.35
Cd53Q61451 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd53Q61451 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd53Q61451 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cd53Q61451 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cd53Q61451 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms