Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.7■□□□□ 0.26
NfkbibQ60778 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.7■□□□□ 0.26
NfkbibQ60778 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.7■□□□□ 0.26
NfkbibQ60778 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.7■□□□□ 0.26
NfkbibQ60778 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.7■□□□□ 0.26
NfkbibQ60778 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NfkbibQ60778 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NfkbibQ60778 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NfkbibQ60778 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
NfkbibQ60778 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
NfkbibQ60778 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NfkbibQ60778 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NfkbibQ60778 Gm28911-201ENSMUST00000188837 117 ntBASIC16.69■□□□□ 0.26
NfkbibQ60778 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.69■□□□□ 0.26
NfkbibQ60778 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.69■□□□□ 0.26
NfkbibQ60778 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NfkbibQ60778 Gm5161-201ENSMUST00000075243 853 ntBASIC16.69■□□□□ 0.26
NfkbibQ60778 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NfkbibQ60778 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NfkbibQ60778 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.68■□□□□ 0.26
NfkbibQ60778 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.68■□□□□ 0.26
NfkbibQ60778 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.68■□□□□ 0.26
NfkbibQ60778 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NfkbibQ60778 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.68■□□□□ 0.26
NfkbibQ60778 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Gm11918-201ENSMUST00000121660 179 ntBASIC16.68■□□□□ 0.26
NfkbibQ60778 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.68■□□□□ 0.26
NfkbibQ60778 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.68■□□□□ 0.26
NfkbibQ60778 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NfkbibQ60778 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NfkbibQ60778 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NfkbibQ60778 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NfkbibQ60778 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NfkbibQ60778 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NfkbibQ60778 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NfkbibQ60778 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NfkbibQ60778 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NfkbibQ60778 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NfkbibQ60778 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NfkbibQ60778 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NfkbibQ60778 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.67■□□□□ 0.26
NfkbibQ60778 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NfkbibQ60778 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NfkbibQ60778 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.67■□□□□ 0.26
NfkbibQ60778 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NfkbibQ60778 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.67■□□□□ 0.26
NfkbibQ60778 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms