Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ClpbQ60649 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ClpbQ60649 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.41□□□□□ -0.26
ClpbQ60649 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.41□□□□□ -0.26
ClpbQ60649 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
ClpbQ60649 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClpbQ60649 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.4□□□□□ -0.26
ClpbQ60649 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ClpbQ60649 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.4□□□□□ -0.26
ClpbQ60649 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ClpbQ60649 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Mir7684-201ENSMUST00000183858 60 ntBASIC13.4□□□□□ -0.26
ClpbQ60649 Gm27680-201ENSMUST00000184192 160 ntBASIC13.4□□□□□ -0.26
ClpbQ60649 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.4□□□□□ -0.26
ClpbQ60649 Gm27989-201ENSMUST00000184721 107 ntBASIC13.4□□□□□ -0.26
ClpbQ60649 Gm45453-201ENSMUST00000211758 853 ntBASIC13.4□□□□□ -0.26
ClpbQ60649 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.4□□□□□ -0.26
ClpbQ60649 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.4□□□□□ -0.26
ClpbQ60649 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
ClpbQ60649 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClpbQ60649 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
ClpbQ60649 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ClpbQ60649 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ClpbQ60649 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ClpbQ60649 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.39□□□□□ -0.27
ClpbQ60649 Gm15653-201ENSMUST00000119247 907 ntBASIC13.39□□□□□ -0.27
ClpbQ60649 Gm12151-201ENSMUST00000121374 290 ntBASIC13.39□□□□□ -0.27
ClpbQ60649 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ClpbQ60649 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ClpbQ60649 AA619741-201ENSMUST00000195095 646 ntBASIC13.39□□□□□ -0.27
ClpbQ60649 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.39□□□□□ -0.27
ClpbQ60649 Dupd1-202ENSMUST00000224735 548 ntBASIC13.39□□□□□ -0.27
ClpbQ60649 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.39□□□□□ -0.27
ClpbQ60649 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ClpbQ60649 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.39□□□□□ -0.27
ClpbQ60649 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClpbQ60649 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClpbQ60649 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.38□□□□□ -0.27
ClpbQ60649 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClpbQ60649 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClpbQ60649 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClpbQ60649 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClpbQ60649 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClpbQ60649 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClpbQ60649 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClpbQ60649 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClpbQ60649 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.38□□□□□ -0.27
ClpbQ60649 Mir1897-201ENSMUST00000122581 272 ntBASIC13.38□□□□□ -0.27
ClpbQ60649 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClpbQ60649 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.38□□□□□ -0.27
ClpbQ60649 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.38□□□□□ -0.27
ClpbQ60649 Gm16476-201ENSMUST00000221544 139 ntBASIC13.38□□□□□ -0.27
ClpbQ60649 Shd-206ENSMUST00000225145 998 ntBASIC13.38□□□□□ -0.27
ClpbQ60649 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms