Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Shank3Q4ACU6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Shank3Q4ACU6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Shank3Q4ACU6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Gm11222-201ENSMUST00000119005 738 ntBASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Gm22334-201ENSMUST00000158070 133 ntBASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Mospd4-201ENSMUST00000180618 576 ntBASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Gm2260-201ENSMUST00000184965 657 ntBASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shank3Q4ACU6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Gm14263-201ENSMUST00000117955 746 ntBASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shank3Q4ACU6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.93■□□□□ 0.3
Shank3Q4ACU6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Gm2231-201ENSMUST00000125661 612 ntBASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Gm37986-201ENSMUST00000193285 383 ntBASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Gm19163-201ENSMUST00000223313 780 ntBASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Shank3Q4ACU6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Gm14208-201ENSMUST00000119645 678 ntBASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shank3Q4ACU6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank3Q4ACU6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms