Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Gm6912-201ENSMUST00000117218 544 ntBASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Gm24694-201ENSMUST00000180054 110 ntBASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Gm27663-201ENSMUST00000184839 110 ntBASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nhlrc4Q3UP44 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Gm14057-201ENSMUST00000120631 482 ntBASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nhlrc4Q3UP44 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nhlrc4Q3UP44 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms