Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Gm24543-201ENSMUST00000103867 82 ntBASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Gm6415-201ENSMUST00000118488 348 ntBASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.14□□□□□ -0.31
Brf2Q3UAW9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.14□□□□□ -0.31
Brf2Q3UAW9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.14□□□□□ -0.31
Brf2Q3UAW9 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.14□□□□□ -0.31
Brf2Q3UAW9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Gm26308-201ENSMUST00000157768 69 ntBASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Gm2445-201ENSMUST00000182798 989 ntBASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Gm8396-201ENSMUST00000057361 823 ntBASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms