Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Q3U1D9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.09□□□□□ -0.47
Q3U1D9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.09□□□□□ -0.47
Q3U1D9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Q3U1D9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Q3U1D9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Gm15806-201ENSMUST00000120696 955 ntBASIC12.09□□□□□ -0.47
Q3U1D9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.09□□□□□ -0.47
Q3U1D9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Q3U1D9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.09□□□□□ -0.47
Q3U1D9 Gm29741-201ENSMUST00000192667 421 ntBASIC12.09□□□□□ -0.47
Q3U1D9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.09□□□□□ -0.47
Q3U1D9 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.09□□□□□ -0.47
Q3U1D9 Gm43433-201ENSMUST00000196573 481 ntBASIC12.09□□□□□ -0.47
Q3U1D9 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.09□□□□□ -0.47
Q3U1D9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.09□□□□□ -0.47
Q3U1D9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Q3U1D9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3U1D9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.09□□□□□ -0.47
Q3U1D9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Q3U1D9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Q3U1D9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Q3U1D9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Q3U1D9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.08□□□□□ -0.48
Q3U1D9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Q3U1D9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Q3U1D9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.08□□□□□ -0.48
Q3U1D9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.08□□□□□ -0.48
Q3U1D9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Q3U1D9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Q3U1D9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.08□□□□□ -0.48
Q3U1D9 Gm28911-201ENSMUST00000188837 117 ntBASIC12.08□□□□□ -0.48
Q3U1D9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.48
Q3U1D9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.08□□□□□ -0.48
Q3U1D9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Q3U1D9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Q3U1D9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Q3U1D9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Q3U1D9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Q3U1D9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Q3U1D9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Q3U1D9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3U1D9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.07□□□□□ -0.48
Q3U1D9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms