Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm2445-201ENSMUST00000182798 989 ntBASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.8□□□□□ -0.04
Trim43aQ3TL54 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.79□□□□□ -0.04
Trim43aQ3TL54 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Gm44608-201ENSMUST00000206827 855 ntBASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43aQ3TL54 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43aQ3TL54 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43aQ3TL54 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms