Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc4Q3TCX3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc4Q3TCX3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.3□□□□□ -0.28
Khdc4Q3TCX3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Khdc4Q3TCX3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Gm42612-201ENSMUST00000197986 623 ntBASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Gm6745-201ENSMUST00000199216 526 ntBASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Gm43170-201ENSMUST00000199827 612 ntBASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Gm9229-201ENSMUST00000222777 126 ntBASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Khdc4Q3TCX3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Gm37230-201ENSMUST00000194491 818 ntBASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Khdc4Q3TCX3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.27□□□□□ -0.28
Khdc4Q3TCX3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Khdc4Q3TCX3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Khdc4Q3TCX3 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.27□□□□□ -0.28
Khdc4Q3TCX3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Khdc4Q3TCX3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Khdc4Q3TCX3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Khdc4Q3TCX3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Khdc4Q3TCX3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Khdc4Q3TCX3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms