Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd8Q09XV5 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chd8Q09XV5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chd8Q09XV5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chd8Q09XV5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.33□□□□□ -0.43
Chd8Q09XV5 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.43
Chd8Q09XV5 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.33□□□□□ -0.43
Chd8Q09XV5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chd8Q09XV5 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.33□□□□□ -0.43
Chd8Q09XV5 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.33□□□□□ -0.44
Chd8Q09XV5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.33□□□□□ -0.44
Chd8Q09XV5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Gm13385-201ENSMUST00000121089 220 ntBASIC12.33□□□□□ -0.44
Chd8Q09XV5 Gm17040-202ENSMUST00000170597 889 ntBASIC12.33□□□□□ -0.44
Chd8Q09XV5 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Gm9996-201ENSMUST00000070359 913 ntBASIC12.33□□□□□ -0.44
Chd8Q09XV5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Chd8Q09XV5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.32□□□□□ -0.44
Chd8Q09XV5 Gm12628-201ENSMUST00000122193 382 ntBASIC12.32□□□□□ -0.44
Chd8Q09XV5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.32□□□□□ -0.44
Chd8Q09XV5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.32□□□□□ -0.44
Chd8Q09XV5 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.32□□□□□ -0.44
Chd8Q09XV5 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Gm10051-201ENSMUST00000145209 414 ntBASIC12.32□□□□□ -0.44
Chd8Q09XV5 Gm19091-201ENSMUST00000208120 978 ntBASIC12.32□□□□□ -0.44
Chd8Q09XV5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd8Q09XV5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Gm13045-201ENSMUST00000119019 712 ntBASIC12.31□□□□□ -0.44
Chd8Q09XV5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.31□□□□□ -0.44
Chd8Q09XV5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms