Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.66□□□□□ -0.22
Col9a1Q05722 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col9a1Q05722 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.66□□□□□ -0.22
Col9a1Q05722 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Gm28439-201ENSMUST00000187714 876 ntBASIC13.65□□□□□ -0.22
Col9a1Q05722 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.65□□□□□ -0.22
Col9a1Q05722 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Gm13097-201ENSMUST00000210722 397 ntBASIC13.65□□□□□ -0.22
Col9a1Q05722 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.65□□□□□ -0.22
Col9a1Q05722 Morn2-202ENSMUST00000227729 656 ntBASIC13.65□□□□□ -0.22
Col9a1Q05722 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.65□□□□□ -0.22
Col9a1Q05722 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col9a1Q05722 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Col9a1Q05722 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col9a1Q05722 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.64□□□□□ -0.23
Col9a1Q05722 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Gm23200-201ENSMUST00000104379 132 ntBASIC13.64□□□□□ -0.23
Col9a1Q05722 Gm13369-201ENSMUST00000119442 987 ntBASIC13.64□□□□□ -0.23
Col9a1Q05722 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC13.64□□□□□ -0.23
Col9a1Q05722 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.64□□□□□ -0.23
Col9a1Q05722 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Ap1g1-206ENSMUST00000179104 1096 ntBASIC13.64□□□□□ -0.23
Col9a1Q05722 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Gm19640-201ENSMUST00000214849 464 ntBASIC13.64□□□□□ -0.23
Col9a1Q05722 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.64□□□□□ -0.23
Col9a1Q05722 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.64□□□□□ -0.23
Col9a1Q05722 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col9a1Q05722 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col9a1Q05722 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.64□□□□□ -0.23
Col9a1Q05722 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms