Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm18018-201ENSMUST00000198273 408 ntBASIC13.91□□□□□ -0.18
Col6a2Q02788 Gm5186-201ENSMUST00000218781 920 ntBASIC13.91□□□□□ -0.18
Col6a2Q02788 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.91□□□□□ -0.18
Col6a2Q02788 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.91□□□□□ -0.18
Col6a2Q02788 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.91□□□□□ -0.18
Col6a2Q02788 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col6a2Q02788 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Col6a2Q02788 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.9□□□□□ -0.18
Col6a2Q02788 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Col6a2Q02788 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.9□□□□□ -0.18
Col6a2Q02788 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.9□□□□□ -0.18
Col6a2Q02788 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.9□□□□□ -0.18
Col6a2Q02788 Gm8927-201ENSMUST00000181978 981 ntBASIC13.9□□□□□ -0.18
Col6a2Q02788 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.9□□□□□ -0.18
Col6a2Q02788 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Gm19220-201ENSMUST00000222682 803 ntBASIC13.9□□□□□ -0.18
Col6a2Q02788 Gm3222-201ENSMUST00000071282 990 ntBASIC13.9□□□□□ -0.18
Col6a2Q02788 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.9□□□□□ -0.18
Col6a2Q02788 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.9□□□□□ -0.18
Col6a2Q02788 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a2Q02788 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col6a2Q02788 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Col6a2Q02788 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.89□□□□□ -0.19
Col6a2Q02788 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.89□□□□□ -0.19
Col6a2Q02788 Gm13385-201ENSMUST00000121089 220 ntBASIC13.89□□□□□ -0.19
Col6a2Q02788 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.89□□□□□ -0.19
Col6a2Q02788 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a2Q02788 Gm8584-201ENSMUST00000171982 758 ntBASIC13.89□□□□□ -0.19
Col6a2Q02788 Gm5279-201ENSMUST00000199575 745 ntBASIC13.89□□□□□ -0.19
Col6a2Q02788 Gm45668-201ENSMUST00000211271 493 ntBASIC13.89□□□□□ -0.19
Col6a2Q02788 Gm9908-201ENSMUST00000211534 448 ntBASIC13.89□□□□□ -0.19
Col6a2Q02788 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Mir497b-201ENSMUST00000093601 125 ntBASIC13.89□□□□□ -0.19
Col6a2Q02788 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.89□□□□□ -0.19
Col6a2Q02788 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col6a2Q02788 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col6a2Q02788 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a2Q02788 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col6a2Q02788 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col6a2Q02788 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms