Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Smn1P97801 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.95□□□□□ -0.5
Smn1P97801 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.95□□□□□ -0.5
Smn1P97801 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.95□□□□□ -0.5
Smn1P97801 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.95□□□□□ -0.5
Smn1P97801 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Smn1P97801 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Smn1P97801 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.94□□□□□ -0.5
Smn1P97801 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.94□□□□□ -0.5
Smn1P97801 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smn1P97801 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Smn1P97801 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.94□□□□□ -0.5
Smn1P97801 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Smn1P97801 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.94□□□□□ -0.5
Smn1P97801 Gm28659-201ENSMUST00000188013 759 ntBASIC11.94□□□□□ -0.5
Smn1P97801 Gm7977-201ENSMUST00000193787 748 ntBASIC11.94□□□□□ -0.5
Smn1P97801 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.94□□□□□ -0.5
Smn1P97801 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.94□□□□□ -0.5
Smn1P97801 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.94□□□□□ -0.5
Smn1P97801 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Gm7461-201ENSMUST00000058918 827 ntBASIC11.94□□□□□ -0.5
Smn1P97801 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.94□□□□□ -0.5
Smn1P97801 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.94□□□□□ -0.5
Smn1P97801 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Smn1P97801 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.94□□□□□ -0.5
Smn1P97801 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.94□□□□□ -0.5
Smn1P97801 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.94□□□□□ -0.5
Smn1P97801 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Smn1P97801 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Smn1P97801 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smn1P97801 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Smn1P97801 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.93□□□□□ -0.5
Smn1P97801 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Smn1P97801 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Smn1P97801 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.93□□□□□ -0.5
Smn1P97801 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.93□□□□□ -0.5
Smn1P97801 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.93□□□□□ -0.5
Smn1P97801 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.93□□□□□ -0.5
Smn1P97801 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.93□□□□□ -0.5
Smn1P97801 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.93□□□□□ -0.5
Smn1P97801 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Smn1P97801 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smn1P97801 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms