Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cacna1aP97445 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.85□□□□□ -0.35
Cacna1aP97445 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.85□□□□□ -0.35
Cacna1aP97445 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.85□□□□□ -0.35
Cacna1aP97445 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.85□□□□□ -0.35
Cacna1aP97445 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.84□□□□□ -0.35
Cacna1aP97445 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.84□□□□□ -0.35
Cacna1aP97445 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.84□□□□□ -0.35
Cacna1aP97445 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.84□□□□□ -0.35
Cacna1aP97445 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.84□□□□□ -0.35
Cacna1aP97445 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Mir877-201ENSMUST00000104738 85 ntBASIC12.84□□□□□ -0.35
Cacna1aP97445 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cacna1aP97445 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Gm37259-201ENSMUST00000193903 849 ntBASIC12.84□□□□□ -0.35
Cacna1aP97445 Gm19184-201ENSMUST00000196798 928 ntBASIC12.84□□□□□ -0.35
Cacna1aP97445 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.84□□□□□ -0.35
Cacna1aP97445 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cacna1aP97445 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cacna1aP97445 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cacna1aP97445 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cacna1aP97445 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cacna1aP97445 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.83□□□□□ -0.36
Cacna1aP97445 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Cacna1aP97445 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.83□□□□□ -0.36
Cacna1aP97445 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.83□□□□□ -0.36
Cacna1aP97445 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.83□□□□□ -0.36
Cacna1aP97445 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Mir433-201ENSMUST00000093564 124 ntBASIC12.83□□□□□ -0.36
Cacna1aP97445 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cacna1aP97445 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.83□□□□□ -0.36
Cacna1aP97445 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cacna1aP97445 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms