Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Gm37411-201ENSMUST00000194180 2282 ntBASIC9.25□□□□□ -0.93
PrkdcP97313 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
PrkdcP97313 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.25□□□□□ -0.93
PrkdcP97313 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
PrkdcP97313 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.25□□□□□ -0.93
PrkdcP97313 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PrkdcP97313 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC9.25□□□□□ -0.93
PrkdcP97313 Gm13611-201ENSMUST00000118269 318 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Gm26361-201ENSMUST00000158868 186 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.24□□□□□ -0.93
PrkdcP97313 Gm3096-201ENSMUST00000185770 364 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Gm44651-201ENSMUST00000207343 372 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 AC154176.1-201ENSMUST00000225897 220 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Gm16372-201ENSMUST00000073088 450 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC9.24□□□□□ -0.93
PrkdcP97313 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC9.24□□□□□ -0.93
PrkdcP97313 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC9.24□□□□□ -0.93
PrkdcP97313 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
PrkdcP97313 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
PrkdcP97313 Gm13296-201ENSMUST00000117854 997 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Gm11978-201ENSMUST00000122315 466 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
PrkdcP97313 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
PrkdcP97313 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Gm17040-202ENSMUST00000170597 889 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Gm4768-201ENSMUST00000206199 686 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.24□□□□□ -0.93
PrkdcP97313 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
PrkdcP97313 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.24□□□□□ -0.93
PrkdcP97313 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.24□□□□□ -0.93
PrkdcP97313 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.24□□□□□ -0.93
PrkdcP97313 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PrkdcP97313 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC9.23□□□□□ -0.93
PrkdcP97313 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.23□□□□□ -0.93
PrkdcP97313 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Gm15515-201ENSMUST00000117827 822 ntBASIC9.23□□□□□ -0.93
PrkdcP97313 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.23□□□□□ -0.93
PrkdcP97313 Gm42779-201ENSMUST00000198807 406 ntBASIC9.23□□□□□ -0.93
PrkdcP97313 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.23□□□□□ -0.93
PrkdcP97313 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
PrkdcP97313 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
PrkdcP97313 Gm12380-201ENSMUST00000119012 544 ntBASIC9.23□□□□□ -0.93
PrkdcP97313 Mir1901-201ENSMUST00000122616 78 ntBASIC9.23□□□□□ -0.93
PrkdcP97313 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.23□□□□□ -0.93
PrkdcP97313 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
PrkdcP97313 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.23□□□□□ -0.93
PrkdcP97313 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
PrkdcP97313 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
PrkdcP97313 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms