Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
Trim43cP86449 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.14■□□□□ 0.01
Trim43cP86449 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.14■□□□□ 0.01
Trim43cP86449 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Gm8927-201ENSMUST00000181978 981 ntBASIC15.14■□□□□ 0.01
Trim43cP86449 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Gm3222-201ENSMUST00000071282 990 ntBASIC15.14■□□□□ 0.01
Trim43cP86449 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim43cP86449 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim43cP86449 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43cP86449 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Trim43cP86449 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trim43cP86449 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim43cP86449 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim43cP86449 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.13■□□□□ 0.01
Trim43cP86449 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim43cP86449 Gm29667-201ENSMUST00000190817 490 ntBASIC15.13■□□□□ 0.01
Trim43cP86449 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim43cP86449 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim43cP86449 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim43cP86449 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim43cP86449 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim43cP86449 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim43cP86449 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43cP86449 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.12■□□□□ 0.01
Trim43cP86449 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Mir698-201ENSMUST00000102164 109 ntBASIC15.12■□□□□ 0.01
Trim43cP86449 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.12■□□□□ 0.01
Trim43cP86449 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Gm6912-201ENSMUST00000117218 544 ntBASIC15.12■□□□□ 0.01
Trim43cP86449 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Trim43cP86449 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Gm13385-201ENSMUST00000121089 220 ntBASIC15.12■□□□□ 0.01
Trim43cP86449 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.12■□□□□ 0.01
Trim43cP86449 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.12■□□□□ 0.01
Trim43cP86449 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim43cP86449 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim43cP86449 Gm21854-201ENSMUST00000179901 471 ntBASIC15.12■□□□□ 0.01
Trim43cP86449 Gm4804-201ENSMUST00000182234 999 ntBASIC15.12■□□□□ 0.01
Trim43cP86449 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim43cP86449 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim43cP86449 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.12■□□□□ 0.01
Trim43cP86449 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim43cP86449 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43cP86449 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trim43cP86449 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim43cP86449 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43cP86449 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43cP86449 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim43cP86449 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim43cP86449 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms