Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Mir1897-201ENSMUST00000122581 272 ntBASIC11.63□□□□□ -0.55
Pdlim4P70271 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Gm6888-201ENSMUST00000221983 706 ntBASIC11.63□□□□□ -0.55
Pdlim4P70271 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.63□□□□□ -0.55
Pdlim4P70271 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.63□□□□□ -0.55
Pdlim4P70271 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim4P70271 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Pdlim4P70271 Rubie-203ENSMUST00000227803 2430 ntBASIC11.62□□□□□ -0.55
Pdlim4P70271 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.62□□□□□ -0.55
Pdlim4P70271 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pdlim4P70271 BC001981-202ENSMUST00000191393 1545 ntBASIC11.62□□□□□ -0.55
Pdlim4P70271 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.62□□□□□ -0.55
Pdlim4P70271 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Gm13453-201ENSMUST00000118708 357 ntBASIC11.62□□□□□ -0.55
Pdlim4P70271 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Gm14767-201ENSMUST00000121559 586 ntBASIC11.62□□□□□ -0.55
Pdlim4P70271 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.62□□□□□ -0.55
Pdlim4P70271 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Gm27533-201ENSMUST00000183800 152 ntBASIC11.62□□□□□ -0.55
Pdlim4P70271 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.62□□□□□ -0.55
Pdlim4P70271 Gm16476-201ENSMUST00000221544 139 ntBASIC11.62□□□□□ -0.55
Pdlim4P70271 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.62□□□□□ -0.55
Pdlim4P70271 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pdlim4P70271 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pdlim4P70271 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim4P70271 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Gm15653-201ENSMUST00000119247 907 ntBASIC11.61□□□□□ -0.55
Pdlim4P70271 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Gm38294-201ENSMUST00000192831 381 ntBASIC11.61□□□□□ -0.55
Pdlim4P70271 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.61□□□□□ -0.55
Pdlim4P70271 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms