Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.25□□□□□ -0.45
Lsm6P62313 Gm27533-201ENSMUST00000183800 152 ntBASIC12.25□□□□□ -0.45
Lsm6P62313 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.25□□□□□ -0.45
Lsm6P62313 Gm33320-201ENSMUST00000192232 530 ntBASIC12.25□□□□□ -0.45
Lsm6P62313 Gm29741-201ENSMUST00000192667 421 ntBASIC12.25□□□□□ -0.45
Lsm6P62313 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.25□□□□□ -0.45
Lsm6P62313 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.25□□□□□ -0.45
Lsm6P62313 Shd-206ENSMUST00000225145 998 ntBASIC12.25□□□□□ -0.45
Lsm6P62313 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm6P62313 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm6P62313 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Lsm6P62313 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Lsm6P62313 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.25□□□□□ -0.45
Lsm6P62313 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.25□□□□□ -0.45
Lsm6P62313 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Lsm6P62313 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.24□□□□□ -0.45
Lsm6P62313 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Lsm6P62313 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Mir1897-201ENSMUST00000122581 272 ntBASIC12.24□□□□□ -0.45
Lsm6P62313 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.24□□□□□ -0.45
Lsm6P62313 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Lsm6P62313 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.24□□□□□ -0.45
Lsm6P62313 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.24□□□□□ -0.45
Lsm6P62313 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lsm6P62313 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Lsm6P62313 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Lsm6P62313 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm6P62313 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm6P62313 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm6P62313 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm6P62313 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Lsm6P62313 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm6P62313 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Lsm6P62313 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm6P62313 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm6P62313 Gm25948-201ENSMUST00000175334 112 ntBASIC12.23□□□□□ -0.45
Lsm6P62313 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm6P62313 Gm44719-201ENSMUST00000206404 149 ntBASIC12.23□□□□□ -0.45
Lsm6P62313 Gm9229-201ENSMUST00000222777 126 ntBASIC12.23□□□□□ -0.45
Lsm6P62313 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lsm6P62313 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm6P62313 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms