Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup43P59235 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nup43P59235 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup43P59235 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.17□□□□□ -0.3
Nup43P59235 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Gm15487-201ENSMUST00000122373 465 ntBASIC13.17□□□□□ -0.3
Nup43P59235 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Nup43P59235 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.17□□□□□ -0.3
Nup43P59235 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.17□□□□□ -0.3
Nup43P59235 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nup43P59235 Gm27838-201ENSMUST00000184829 128 ntBASIC13.17□□□□□ -0.3
Nup43P59235 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup43P59235 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nup43P59235 Gm29741-201ENSMUST00000192667 421 ntBASIC13.17□□□□□ -0.3
Nup43P59235 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.17□□□□□ -0.3
Nup43P59235 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.17□□□□□ -0.3
Nup43P59235 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.17□□□□□ -0.3
Nup43P59235 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup43P59235 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.16□□□□□ -0.3
Nup43P59235 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nup43P59235 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Nup43P59235 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Nup43P59235 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.16□□□□□ -0.3
Nup43P59235 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 Gm10766-202ENSMUST00000194123 606 ntBASIC13.16□□□□□ -0.3
Nup43P59235 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.16□□□□□ -0.3
Nup43P59235 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.16□□□□□ -0.3
Nup43P59235 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nup43P59235 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup43P59235 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nup43P59235 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup43P59235 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.15□□□□□ -0.3
Nup43P59235 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Nup43P59235 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.15□□□□□ -0.3
Nup43P59235 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup43P59235 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup43P59235 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup43P59235 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup43P59235 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup43P59235 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nup43P59235 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nup43P59235 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Nup43P59235 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup43P59235 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup43P59235 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup43P59235 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nup43P59235 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms