Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.25□□□□□ -0.13
ClgnP52194 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ClgnP52194 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ClgnP52194 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.25□□□□□ -0.13
ClgnP52194 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.24□□□□□ -0.13
ClgnP52194 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ClgnP52194 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ClgnP52194 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
ClgnP52194 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
ClgnP52194 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ClgnP52194 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ClgnP52194 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.24□□□□□ -0.13
ClgnP52194 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.24□□□□□ -0.13
ClgnP52194 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
ClgnP52194 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.24□□□□□ -0.13
ClgnP52194 Gm29310-201ENSMUST00000185468 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21825-201ENSMUST00000185728 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm29109-201ENSMUST00000185895 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21896-201ENSMUST00000186520 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21873-201ENSMUST00000186728 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21794-201ENSMUST00000187056 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21880-201ENSMUST00000187275 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21826-201ENSMUST00000187451 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21198-201ENSMUST00000188393 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21749-201ENSMUST00000189343 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21901-201ENSMUST00000189568 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm29424-201ENSMUST00000189716 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm28599-201ENSMUST00000189838 694 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21867-201ENSMUST00000189917 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm29269-201ENSMUST00000190087 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21722-201ENSMUST00000190153 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm28423-201ENSMUST00000190701 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21899-201ENSMUST00000190745 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21910-201ENSMUST00000191163 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21849-201ENSMUST00000191571 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm28678-201ENSMUST00000191593 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm20910-201ENSMUST00000193268 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm21871-201ENSMUST00000194621 696 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm44335-201ENSMUST00000196879 141 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm44297-201ENSMUST00000198304 141 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Gm44346-201ENSMUST00000198851 141 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Gm44608-201ENSMUST00000206827 855 ntBASIC14.24□□□□□ -0.13
ClgnP52194 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.24□□□□□ -0.13
ClgnP52194 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.24□□□□□ -0.13
ClgnP52194 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClgnP52194 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.23□□□□□ -0.13
ClgnP52194 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
ClgnP52194 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.23□□□□□ -0.13
ClgnP52194 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.23□□□□□ -0.13
ClgnP52194 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.23□□□□□ -0.13
ClgnP52194 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ClgnP52194 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.23□□□□□ -0.13
ClgnP52194 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.23□□□□□ -0.13
ClgnP52194 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms