Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.73□□□□□ -0.05
Shmt1P50431 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.73□□□□□ -0.05
Shmt1P50431 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.73□□□□□ -0.05
Shmt1P50431 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Shmt1P50431 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.73□□□□□ -0.05
Shmt1P50431 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
Shmt1P50431 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shmt1P50431 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Shmt1P50431 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.72□□□□□ -0.05
Shmt1P50431 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Gm12490-201ENSMUST00000120255 560 ntBASIC14.72□□□□□ -0.05
Shmt1P50431 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.72□□□□□ -0.05
Shmt1P50431 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.72□□□□□ -0.05
Shmt1P50431 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.72□□□□□ -0.05
Shmt1P50431 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Shmt1P50431 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.72□□□□□ -0.05
Shmt1P50431 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.72□□□□□ -0.05
Shmt1P50431 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Shmt1P50431 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Shmt1P50431 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Shmt1P50431 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.72□□□□□ -0.05
Shmt1P50431 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Shmt1P50431 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shmt1P50431 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.71□□□□□ -0.05
Shmt1P50431 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.71□□□□□ -0.05
Shmt1P50431 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Shmt1P50431 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Shmt1P50431 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.71□□□□□ -0.05
Shmt1P50431 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.71□□□□□ -0.05
Shmt1P50431 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Shmt1P50431 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Shmt1P50431 Gm5425-201ENSMUST00000214125 459 ntBASIC14.71□□□□□ -0.05
Shmt1P50431 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Shmt1P50431 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shmt1P50431 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Shmt1P50431 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shmt1P50431 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shmt1P50431 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shmt1P50431 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shmt1P50431 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.7□□□□□ -0.06
Shmt1P50431 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Shmt1P50431 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.7□□□□□ -0.06
Shmt1P50431 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.7□□□□□ -0.06
Shmt1P50431 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Shmt1P50431 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Shmt1P50431 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Shmt1P50431 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Shmt1P50431 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shmt1P50431 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.7□□□□□ -0.06
Shmt1P50431 Gm28631-201ENSMUST00000190740 334 ntBASIC14.7□□□□□ -0.06
Shmt1P50431 Gm5279-201ENSMUST00000199575 745 ntBASIC14.7□□□□□ -0.06
Shmt1P50431 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms