Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nkx1-2P42580 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.14■□□□□ 0.33
Nkx1-2P42580 Gm13823-201ENSMUST00000119930 345 ntBASIC17.14■□□□□ 0.33
Nkx1-2P42580 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Mir6990-201ENSMUST00000183724 91 ntBASIC17.14■□□□□ 0.33
Nkx1-2P42580 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.14■□□□□ 0.33
Nkx1-2P42580 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Gm27194-201ENSMUST00000175753 2936 ntBASIC17.14■□□□□ 0.33
Nkx1-2P42580 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nkx1-2P42580 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Gm27196-201ENSMUST00000184787 2582 ntBASIC17.13■□□□□ 0.33
Nkx1-2P42580 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Gm29541-201ENSMUST00000191351 678 ntBASIC17.13■□□□□ 0.33
Nkx1-2P42580 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx1-2P42580 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.13■□□□□ 0.33
Nkx1-2P42580 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx1-2P42580 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.12■□□□□ 0.33
Nkx1-2P42580 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.12■□□□□ 0.33
Nkx1-2P42580 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Gm44608-201ENSMUST00000206827 855 ntBASIC17.12■□□□□ 0.33
Nkx1-2P42580 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nkx1-2P42580 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-2P42580 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Gm18049-201ENSMUST00000208909 581 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms