Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox6P40645 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox6P40645 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.11□□□□□ -0.31
Sox6P40645 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.11□□□□□ -0.31
Sox6P40645 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox6P40645 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.11□□□□□ -0.31
Sox6P40645 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.11□□□□□ -0.31
Sox6P40645 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.11□□□□□ -0.31
Sox6P40645 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.11□□□□□ -0.31
Sox6P40645 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sox6P40645 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Sox6P40645 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sox6P40645 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox6P40645 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.1□□□□□ -0.31
Sox6P40645 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox6P40645 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox6P40645 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Sox6P40645 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox6P40645 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Sox6P40645 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Sox6P40645 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox6P40645 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Sox6P40645 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox6P40645 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.09□□□□□ -0.31
Sox6P40645 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Gm27920-201ENSMUST00000183953 96 ntBASIC13.09□□□□□ -0.31
Sox6P40645 Gm2451-201ENSMUST00000199447 999 ntBASIC13.09□□□□□ -0.31
Sox6P40645 Gm10290-201ENSMUST00000200451 999 ntBASIC13.09□□□□□ -0.31
Sox6P40645 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox6P40645 Gm9182-201ENSMUST00000217829 639 ntBASIC13.09□□□□□ -0.31
Sox6P40645 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox6P40645 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.09□□□□□ -0.31
Sox6P40645 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms