Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.05□□□□□ -0.16
Fen1P39749 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fen1P39749 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Fen1P39749 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fen1P39749 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fen1P39749 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Fen1P39749 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.05□□□□□ -0.16
Fen1P39749 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fen1P39749 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Fen1P39749 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.05□□□□□ -0.16
Fen1P39749 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.05□□□□□ -0.16
Fen1P39749 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fen1P39749 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fen1P39749 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.04□□□□□ -0.16
Fen1P39749 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.04□□□□□ -0.16
Fen1P39749 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Fen1P39749 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.04□□□□□ -0.16
Fen1P39749 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fen1P39749 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Gm12260-201ENSMUST00000122447 411 ntBASIC14.04□□□□□ -0.16
Fen1P39749 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.04□□□□□ -0.16
Fen1P39749 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Fen1P39749 Gm2272-201ENSMUST00000194903 582 ntBASIC14.04□□□□□ -0.16
Fen1P39749 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Fen1P39749 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Fen1P39749 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Fen1P39749 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fen1P39749 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.03□□□□□ -0.16
Fen1P39749 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Gm16198-201ENSMUST00000118766 670 ntBASIC14.03□□□□□ -0.16
Fen1P39749 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.03□□□□□ -0.16
Fen1P39749 Gm5264-201ENSMUST00000190584 848 ntBASIC14.03□□□□□ -0.16
Fen1P39749 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.03□□□□□ -0.16
Fen1P39749 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.03□□□□□ -0.16
Fen1P39749 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.03□□□□□ -0.16
Fen1P39749 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.03□□□□□ -0.16
Fen1P39749 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.03□□□□□ -0.16
Fen1P39749 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.03□□□□□ -0.16
Fen1P39749 Psmb5-202ENSMUST00000227257 622 ntBASIC14.03□□□□□ -0.16
Fen1P39749 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Fen1P39749 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.03□□□□□ -0.16
Fen1P39749 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.03□□□□□ -0.16
Fen1P39749 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Fen1P39749 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.03□□□□□ -0.16
Fen1P39749 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Fen1P39749 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Fen1P39749 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fen1P39749 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.02□□□□□ -0.16
Fen1P39749 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fen1P39749 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Fen1P39749 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fen1P39749 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fen1P39749 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fen1P39749 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Fen1P39749 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fen1P39749 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Fen1P39749 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fen1P39749 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Fen1P39749 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Fen1P39749 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fen1P39749 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.02□□□□□ -0.17
Fen1P39749 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fen1P39749 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.02□□□□□ -0.17
Fen1P39749 Gm27628-201ENSMUST00000184911 107 ntBASIC14.02□□□□□ -0.17
Fen1P39749 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.02□□□□□ -0.17
Fen1P39749 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.02□□□□□ -0.17
Fen1P39749 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Fen1P39749 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms