Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col18a1P39061 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC18.05■□□□□ 0.48
Col18a1P39061 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.05■□□□□ 0.48
Col18a1P39061 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Col18a1P39061 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC18.05■□□□□ 0.48
Col18a1P39061 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col18a1P39061 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Col18a1P39061 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col18a1P39061 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col18a1P39061 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col18a1P39061 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col18a1P39061 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col18a1P39061 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col18a1P39061 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col18a1P39061 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col18a1P39061 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col18a1P39061 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col18a1P39061 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Col18a1P39061 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Col18a1P39061 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Gm10752-201ENSMUST00000218348 729 ntBASIC18.04■□□□□ 0.48
Col18a1P39061 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Gm8712-201ENSMUST00000221090 701 ntBASIC18.04■□□□□ 0.48
Col18a1P39061 AC140293.1-201ENSMUST00000225626 1247 ntBASIC18.04■□□□□ 0.48
Col18a1P39061 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Gm43908-201ENSMUST00000205074 1472 ntBASIC18.04■□□□□ 0.48
Col18a1P39061 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Col18a1P39061 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Col18a1P39061 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Col18a1P39061 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Col18a1P39061 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC18.04■□□□□ 0.48
Col18a1P39061 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Gm17208-201ENSMUST00000168388 535 ntBASIC18.04■□□□□ 0.48
Col18a1P39061 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 AC166095.1-201ENSMUST00000223731 1241 ntBASIC18.04■□□□□ 0.48
Col18a1P39061 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col18a1P39061 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC18.03■□□□□ 0.48
Col18a1P39061 Efs-202ENSMUST00000227037 2540 ntBASIC18.03■□□□□ 0.48
Col18a1P39061 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col18a1P39061 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col18a1P39061 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col18a1P39061 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col18a1P39061 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col18a1P39061 Gm9279-201ENSMUST00000223175 1606 ntBASIC18.03■□□□□ 0.48
Col18a1P39061 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Col18a1P39061 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col18a1P39061 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col18a1P39061 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.03■□□□□ 0.48
Col18a1P39061 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col18a1P39061 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col18a1P39061 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.02■□□□□ 0.48
Col18a1P39061 Gm14371-201ENSMUST00000138925 1518 ntBASIC18.02■□□□□ 0.48
Col18a1P39061 Gm13996-201ENSMUST00000118456 430 ntBASIC18.02■□□□□ 0.48
Col18a1P39061 Gm12134-201ENSMUST00000122109 520 ntBASIC18.02■□□□□ 0.48
Col18a1P39061 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC18.02■□□□□ 0.48
Col18a1P39061 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Col18a1P39061 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col18a1P39061 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC18.02■□□□□ 0.48
Col18a1P39061 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Col18a1P39061 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col18a1P39061 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col18a1P39061 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col18a1P39061 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col18a1P39061 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col18a1P39061 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col18a1P39061 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col18a1P39061 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Col18a1P39061 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col18a1P39061 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col18a1P39061 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col18a1P39061 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col18a1P39061 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col18a1P39061 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col18a1P39061 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Col18a1P39061 Gm8194-201ENSMUST00000159783 859 ntBASIC18.02■□□□□ 0.47
Col18a1P39061 Gm7848-201ENSMUST00000210739 718 ntBASIC18.02■□□□□ 0.47
Col18a1P39061 AC154276.3-201ENSMUST00000227643 998 ntBASIC18.02■□□□□ 0.47
Col18a1P39061 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col18a1P39061 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.01■□□□□ 0.47
Col18a1P39061 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col18a1P39061 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col18a1P39061 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col18a1P39061 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col18a1P39061 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col18a1P39061 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col18a1P39061 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.01■□□□□ 0.47
Col18a1P39061 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col18a1P39061 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col18a1P39061 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms