Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.83□□□□□ -0.36
Sftpa1P35242 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Gm13350-201ENSMUST00000120519 479 ntBASIC12.83□□□□□ -0.36
Sftpa1P35242 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.83□□□□□ -0.36
Sftpa1P35242 Gm27331-201ENSMUST00000183705 60 ntBASIC12.83□□□□□ -0.36
Sftpa1P35242 Gm27772-201ENSMUST00000184900 187 ntBASIC12.83□□□□□ -0.36
Sftpa1P35242 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Gm19309-201ENSMUST00000218295 205 ntBASIC12.83□□□□□ -0.36
Sftpa1P35242 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Sftpa1P35242 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sftpa1P35242 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Sftpa1P35242 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sftpa1P35242 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Sftpa1P35242 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Proscos-202ENSMUST00000178990 666 ntBASIC12.82□□□□□ -0.36
Sftpa1P35242 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.82□□□□□ -0.36
Sftpa1P35242 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.82□□□□□ -0.36
Sftpa1P35242 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.82□□□□□ -0.36
Sftpa1P35242 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sftpa1P35242 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.82□□□□□ -0.36
Sftpa1P35242 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Sftpa1P35242 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sftpa1P35242 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sftpa1P35242 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sftpa1P35242 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.81□□□□□ -0.36
Sftpa1P35242 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Sftpa1P35242 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.81□□□□□ -0.36
Sftpa1P35242 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Gm22018-201ENSMUST00000104357 131 ntBASIC12.81□□□□□ -0.36
Sftpa1P35242 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sftpa1P35242 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.81□□□□□ -0.36
Sftpa1P35242 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.81□□□□□ -0.36
Sftpa1P35242 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sftpa1P35242 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.81□□□□□ -0.36
Sftpa1P35242 Gm38002-201ENSMUST00000193255 180 ntBASIC12.81□□□□□ -0.36
Sftpa1P35242 Gm29705-201ENSMUST00000212598 474 ntBASIC12.81□□□□□ -0.36
Sftpa1P35242 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.81□□□□□ -0.36
Sftpa1P35242 Gm18473-201ENSMUST00000220543 868 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms