Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Slc6a11P31650 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.26□□□□□ -0.29
Slc6a11P31650 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Slc6a11P31650 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Slc6a11P31650 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.26□□□□□ -0.29
Slc6a11P31650 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Slc6a11P31650 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a11P31650 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Slc6a11P31650 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.26□□□□□ -0.29
Slc6a11P31650 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slc6a11P31650 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.25□□□□□ -0.29
Slc6a11P31650 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Slc6a11P31650 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.25□□□□□ -0.29
Slc6a11P31650 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc6a11P31650 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc6a11P31650 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.25□□□□□ -0.29
Slc6a11P31650 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slc6a11P31650 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.25□□□□□ -0.29
Slc6a11P31650 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a11P31650 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.24□□□□□ -0.29
Slc6a11P31650 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a11P31650 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Slc6a11P31650 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.24□□□□□ -0.29
Slc6a11P31650 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a11P31650 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a11P31650 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a11P31650 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Slc6a11P31650 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slc6a11P31650 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a11P31650 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slc6a11P31650 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a11P31650 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a11P31650 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a11P31650 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a11P31650 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a11P31650 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a11P31650 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a11P31650 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a11P31650 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc6a11P31650 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms