Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.85□□□□□ -0.35
Nedd8P29595 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nedd8P29595 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Nedd8P29595 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nedd8P29595 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nedd8P29595 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nedd8P29595 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.85□□□□□ -0.35
Nedd8P29595 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Gm22240-201ENSMUST00000175225 82 ntBASIC12.85□□□□□ -0.35
Nedd8P29595 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nedd8P29595 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.85□□□□□ -0.35
Nedd8P29595 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nedd8P29595 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.85□□□□□ -0.35
Nedd8P29595 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nedd8P29595 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nedd8P29595 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Nedd8P29595 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.85□□□□□ -0.35
Nedd8P29595 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.85□□□□□ -0.35
Nedd8P29595 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nedd8P29595 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.85□□□□□ -0.35
Nedd8P29595 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nedd8P29595 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.84□□□□□ -0.35
Nedd8P29595 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nedd8P29595 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Nedd8P29595 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Nedd8P29595 Olfr129-201ENSMUST00000122318 993 ntBASIC12.84□□□□□ -0.35
Nedd8P29595 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.84□□□□□ -0.35
Nedd8P29595 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nedd8P29595 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.84□□□□□ -0.35
Nedd8P29595 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nedd8P29595 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.84□□□□□ -0.35
Nedd8P29595 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nedd8P29595 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nedd8P29595 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Nedd8P29595 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.83□□□□□ -0.35
Nedd8P29595 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nedd8P29595 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nedd8P29595 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nedd8P29595 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Nedd8P29595 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nedd8P29595 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nedd8P29595 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.83□□□□□ -0.36
Nedd8P29595 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nedd8P29595 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms