Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.89□□□□□ -0.35
Cd40lgP27548 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cd40lgP27548 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cd40lgP27548 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Cd40lgP27548 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.89□□□□□ -0.35
Cd40lgP27548 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.89□□□□□ -0.35
Cd40lgP27548 AA619741-201ENSMUST00000195095 646 ntBASIC12.89□□□□□ -0.35
Cd40lgP27548 Gm6888-201ENSMUST00000221983 706 ntBASIC12.89□□□□□ -0.35
Cd40lgP27548 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cd40lgP27548 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cd40lgP27548 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd40lgP27548 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Cd40lgP27548 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.88□□□□□ -0.35
Cd40lgP27548 Auts2-212ENSMUST00000178555 309 ntBASIC12.88□□□□□ -0.35
Cd40lgP27548 Gm29541-201ENSMUST00000191351 678 ntBASIC12.88□□□□□ -0.35
Cd40lgP27548 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Cd40lgP27548 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.88□□□□□ -0.35
Cd40lgP27548 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd40lgP27548 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.87□□□□□ -0.35
Cd40lgP27548 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Cd40lgP27548 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
Cd40lgP27548 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.87□□□□□ -0.35
Cd40lgP27548 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm28630-201ENSMUST00000187806 498 ntBASIC12.87□□□□□ -0.35
Cd40lgP27548 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.87□□□□□ -0.35
Cd40lgP27548 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.87□□□□□ -0.35
Cd40lgP27548 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cd40lgP27548 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms