Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm17795-201ENSMUST00000214505 757 ntBASIC11.64□□□□□ -0.55
Col8a2P25318 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col8a2P25318 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col8a2P25318 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.63□□□□□ -0.55
Col8a2P25318 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col8a2P25318 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Col8a2P25318 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.63□□□□□ -0.55
Col8a2P25318 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col8a2P25318 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.63□□□□□ -0.55
Col8a2P25318 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.63□□□□□ -0.55
Col8a2P25318 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.63□□□□□ -0.55
Col8a2P25318 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Col8a2P25318 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.63□□□□□ -0.55
Col8a2P25318 Gm8584-201ENSMUST00000171982 758 ntBASIC11.63□□□□□ -0.55
Col8a2P25318 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.63□□□□□ -0.55
Col8a2P25318 Gm8927-201ENSMUST00000181978 981 ntBASIC11.63□□□□□ -0.55
Col8a2P25318 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.63□□□□□ -0.55
Col8a2P25318 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.63□□□□□ -0.55
Col8a2P25318 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.63□□□□□ -0.55
Col8a2P25318 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.63□□□□□ -0.55
Col8a2P25318 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Gm3222-201ENSMUST00000071282 990 ntBASIC11.63□□□□□ -0.55
Col8a2P25318 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Col8a2P25318 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col8a2P25318 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Col8a2P25318 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col8a2P25318 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Col8a2P25318 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.62□□□□□ -0.55
Col8a2P25318 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Col8a2P25318 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.62□□□□□ -0.55
Col8a2P25318 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Col8a2P25318 Gm15240-201ENSMUST00000118156 720 ntBASIC11.62□□□□□ -0.55
Col8a2P25318 Gm12490-201ENSMUST00000120255 560 ntBASIC11.62□□□□□ -0.55
Col8a2P25318 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Col8a2P25318 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.62□□□□□ -0.55
Col8a2P25318 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col8a2P25318 Gm37917-201ENSMUST00000194711 392 ntBASIC11.62□□□□□ -0.55
Col8a2P25318 Gm9794-201ENSMUST00000202370 423 ntBASIC11.62□□□□□ -0.55
Col8a2P25318 Gm44608-201ENSMUST00000206827 855 ntBASIC11.62□□□□□ -0.55
Col8a2P25318 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Col8a2P25318 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.62□□□□□ -0.55
Col8a2P25318 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.62□□□□□ -0.55
Col8a2P25318 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Col8a2P25318 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col8a2P25318 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms