Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Irf8P23611 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.02■□□□□ -0
Irf8P23611 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.02■□□□□ -0
Irf8P23611 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Irf8P23611 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Irf8P23611 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.02■□□□□ -0
Irf8P23611 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Irf8P23611 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Irf8P23611 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Irf8P23611 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Irf8P23611 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Irf8P23611 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.02■□□□□ -0
Irf8P23611 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.02■□□□□ -0
Irf8P23611 Gm10576-201ENSMUST00000191927 825 ntBASIC15.02■□□□□ -0
Irf8P23611 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Irf8P23611 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Irf8P23611 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.02■□□□□ -0
Irf8P23611 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.02□□□□□ -0.01
Irf8P23611 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Irf8P23611 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Irf8P23611 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Irf8P23611 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Irf8P23611 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Irf8P23611 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Irf8P23611 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Irf8P23611 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Irf8P23611 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.01□□□□□ -0.01
Irf8P23611 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Gm22189-201ENSMUST00000103822 86 ntBASIC15.01□□□□□ -0.01
Irf8P23611 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.01□□□□□ -0.01
Irf8P23611 Gm27772-201ENSMUST00000184900 187 ntBASIC15.01□□□□□ -0.01
Irf8P23611 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.01□□□□□ -0.01
Irf8P23611 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Irf8P23611 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Irf8P23611 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Irf8P23611 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15□□□□□ -0.01
Irf8P23611 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Irf8P23611 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Irf8P23611 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Irf8P23611 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15□□□□□ -0.01
Irf8P23611 Gm17795-201ENSMUST00000214505 757 ntBASIC15□□□□□ -0.01
Irf8P23611 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Gm37133-201ENSMUST00000192705 1922 ntBASIC15□□□□□ -0.01
Irf8P23611 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Irf8P23611 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Irf8P23611 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.99□□□□□ -0.01
Irf8P23611 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Irf8P23611 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
Irf8P23611 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Irf8P23611 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.99□□□□□ -0.01
Irf8P23611 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Irf8P23611 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Irf8P23611 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms