Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.24■□□□□ 0.03
Pde6bP23440 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pde6bP23440 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.24■□□□□ 0.03
Pde6bP23440 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pde6bP23440 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Pde6bP23440 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Gm12341-201ENSMUST00000119724 503 ntBASIC15.23■□□□□ 0.03
Pde6bP23440 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.23■□□□□ 0.03
Pde6bP23440 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pde6bP23440 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pde6bP23440 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.23■□□□□ 0.03
Pde6bP23440 Gm5279-201ENSMUST00000199575 745 ntBASIC15.23■□□□□ 0.03
Pde6bP23440 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Gm17795-201ENSMUST00000214505 757 ntBASIC15.23■□□□□ 0.03
Pde6bP23440 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pde6bP23440 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pde6bP23440 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pde6bP23440 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.22■□□□□ 0.03
Pde6bP23440 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pde6bP23440 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.22■□□□□ 0.03
Pde6bP23440 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pde6bP23440 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.22■□□□□ 0.03
Pde6bP23440 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.22■□□□□ 0.03
Pde6bP23440 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.22■□□□□ 0.03
Pde6bP23440 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.22■□□□□ 0.03
Pde6bP23440 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.22■□□□□ 0.03
Pde6bP23440 Gm27701-201ENSMUST00000184498 110 ntBASIC15.22■□□□□ 0.03
Pde6bP23440 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.22■□□□□ 0.03
Pde6bP23440 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.22■□□□□ 0.03
Pde6bP23440 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.22■□□□□ 0.03
Pde6bP23440 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pde6bP23440 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Pde6bP23440 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pde6bP23440 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pde6bP23440 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pde6bP23440 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pde6bP23440 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.21■□□□□ 0.03
Pde6bP23440 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pde6bP23440 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Pde6bP23440 Gm13829-201ENSMUST00000119600 138 ntBASIC15.21■□□□□ 0.03
Pde6bP23440 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pde6bP23440 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.21■□□□□ 0.03
Pde6bP23440 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.21■□□□□ 0.03
Pde6bP23440 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.21■□□□□ 0.03
Pde6bP23440 Gm18062-201ENSMUST00000208020 547 ntBASIC15.21■□□□□ 0.03
Pde6bP23440 Gm18055-201ENSMUST00000208254 547 ntBASIC15.21■□□□□ 0.03
Pde6bP23440 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Pde6bP23440 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pde6bP23440 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms