Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.05□□□□□ -0.32
Clk1P22518 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.04□□□□□ -0.32
Clk1P22518 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Gm12882-201ENSMUST00000121696 517 ntBASIC13.04□□□□□ -0.32
Clk1P22518 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.04□□□□□ -0.32
Clk1P22518 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.04□□□□□ -0.32
Clk1P22518 Gm24158-201ENSMUST00000175263 71 ntBASIC13.04□□□□□ -0.32
Clk1P22518 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.04□□□□□ -0.32
Clk1P22518 Gm44335-201ENSMUST00000196879 141 ntBASIC13.04□□□□□ -0.32
Clk1P22518 Gm44297-201ENSMUST00000198304 141 ntBASIC13.04□□□□□ -0.32
Clk1P22518 Gm44346-201ENSMUST00000198851 141 ntBASIC13.04□□□□□ -0.32
Clk1P22518 Gm5312-201ENSMUST00000203728 547 ntBASIC13.04□□□□□ -0.32
Clk1P22518 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.04□□□□□ -0.32
Clk1P22518 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Clk1P22518 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Clk1P22518 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Clk1P22518 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.04□□□□□ -0.32
Clk1P22518 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clk1P22518 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clk1P22518 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Clk1P22518 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Clk1P22518 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.03□□□□□ -0.32
Clk1P22518 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.03□□□□□ -0.32
Clk1P22518 Gm10253-201ENSMUST00000194270 940 ntBASIC13.03□□□□□ -0.32
Clk1P22518 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Clk1P22518 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Clk1P22518 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.03□□□□□ -0.32
Clk1P22518 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clk1P22518 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Clk1P22518 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clk1P22518 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Clk1P22518 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clk1P22518 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clk1P22518 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.02□□□□□ -0.32
Clk1P22518 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Clk1P22518 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Clk1P22518 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clk1P22518 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clk1P22518 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clk1P22518 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clk1P22518 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clk1P22518 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.02□□□□□ -0.33
Clk1P22518 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.02□□□□□ -0.33
Clk1P22518 Gm26308-201ENSMUST00000157768 69 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Clk1P22518 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clk1P22518 Gm29310-201ENSMUST00000185468 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm21825-201ENSMUST00000185728 696 ntBASIC13.02□□□□□ -0.33
Clk1P22518 Gm29109-201ENSMUST00000185895 696 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms