Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VimP20152 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VimP20152 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VimP20152 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.13□□□□□ -0.15
VimP20152 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Gm27742-201ENSMUST00000184667 60 ntBASIC14.13□□□□□ -0.15
VimP20152 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VimP20152 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VimP20152 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.13□□□□□ -0.15
VimP20152 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VimP20152 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VimP20152 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VimP20152 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VimP20152 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.12□□□□□ -0.15
VimP20152 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
VimP20152 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VimP20152 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.12□□□□□ -0.15
VimP20152 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VimP20152 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
VimP20152 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.12□□□□□ -0.15
VimP20152 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.12□□□□□ -0.15
VimP20152 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VimP20152 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
VimP20152 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.12□□□□□ -0.15
VimP20152 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.12□□□□□ -0.15
VimP20152 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VimP20152 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.12□□□□□ -0.15
VimP20152 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VimP20152 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.11□□□□□ -0.15
VimP20152 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VimP20152 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VimP20152 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.11□□□□□ -0.15
VimP20152 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.11□□□□□ -0.15
VimP20152 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VimP20152 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VimP20152 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VimP20152 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Gm11780-201ENSMUST00000136880 516 ntBASIC14.11□□□□□ -0.15
VimP20152 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.11□□□□□ -0.15
VimP20152 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VimP20152 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.11□□□□□ -0.15
VimP20152 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VimP20152 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms