Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Cd48P18181 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cd48P18181 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.51□□□□□ -0.41
Cd48P18181 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.51□□□□□ -0.41
Cd48P18181 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.51□□□□□ -0.41
Cd48P18181 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.51□□□□□ -0.41
Cd48P18181 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cd48P18181 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd48P18181 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.51□□□□□ -0.41
Cd48P18181 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.51□□□□□ -0.41
Cd48P18181 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Cd48P18181 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Cd48P18181 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd48P18181 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd48P18181 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cd48P18181 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Cd48P18181 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd48P18181 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cd48P18181 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Cd48P18181 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Cd48P18181 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cd48P18181 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cd48P18181 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.5□□□□□ -0.41
Cd48P18181 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.5□□□□□ -0.41
Cd48P18181 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.5□□□□□ -0.41
Cd48P18181 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.5□□□□□ -0.41
Cd48P18181 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cd48P18181 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.5□□□□□ -0.41
Cd48P18181 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cd48P18181 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd48P18181 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cd48P18181 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.49□□□□□ -0.41
Cd48P18181 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd48P18181 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.49□□□□□ -0.41
Cd48P18181 AA619741-201ENSMUST00000195095 646 ntBASIC12.49□□□□□ -0.41
Cd48P18181 Gm20553-201ENSMUST00000204205 844 ntBASIC12.49□□□□□ -0.41
Cd48P18181 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms