Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Ccl1P10146 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ccl1P10146 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Gm12895-201ENSMUST00000122214 226 ntBASIC10.8□□□□□ -0.68
Ccl1P10146 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Ccl1P10146 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Gm10231-201ENSMUST00000181584 441 ntBASIC10.8□□□□□ -0.68
Ccl1P10146 Mir6982-201ENSMUST00000184354 68 ntBASIC10.8□□□□□ -0.68
Ccl1P10146 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Gm10175-202ENSMUST00000208752 441 ntBASIC10.8□□□□□ -0.68
Ccl1P10146 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.8□□□□□ -0.68
Ccl1P10146 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.8□□□□□ -0.68
Ccl1P10146 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ccl1P10146 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Ccl1P10146 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Ccl1P10146 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.8□□□□□ -0.68
Ccl1P10146 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl1P10146 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ccl1P10146 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ccl1P10146 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ccl1P10146 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.79□□□□□ -0.68
Ccl1P10146 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ccl1P10146 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Gm4535-201ENSMUST00000182274 558 ntBASIC10.79□□□□□ -0.68
Ccl1P10146 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.79□□□□□ -0.68
Ccl1P10146 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.79□□□□□ -0.68
Ccl1P10146 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 AC154757.1-201ENSMUST00000228289 336 ntBASIC10.79□□□□□ -0.68
Ccl1P10146 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ccl1P10146 Gm10355-201ENSMUST00000097146 517 ntBASIC10.79□□□□□ -0.68
Ccl1P10146 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ccl1P10146 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.79□□□□□ -0.68
Ccl1P10146 Gm3928-201ENSMUST00000121141 1307 ntBASIC10.79□□□□□ -0.68
Ccl1P10146 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl1P10146 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl1P10146 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ccl1P10146 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl1P10146 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccl1P10146 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccl1P10146 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms